Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Epidermis

Cell type

AG10803

Tissue

skin

Description

abdominal skin fibroblasts from apparently heathly 22 year old, "8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY" -Coriell

Sample

source_name

AG10803

biomaterial_provider

AG10803

cell

AG10803

cell organism

Human

cell description

abdominal skin fibroblasts from apparently heathly 22 year old

cell karyotype

"8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY" -Coriell

cell lineage

mesoderm

cell sex

M

antibody

CTCF

antibody description

rabbit polyclonal

antibody target description

CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.

antibody vendor name

Millipore

replicate

1

Sequenced DNA Library

library_name

GSM749714: Stam_AG10803_CTCF_1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

32247818

Reads aligned (%)

97.8

Duplicates removed (%)

12.1

Number of peaks

38952 (qval < 1E-05)

hg19

Number of total reads

32247818

Reads aligned (%)

97.0

Duplicates removed (%)

13.4

Number of peaks

38874 (qval < 1E-05)